- Scientific Name
- Cyprinus carpio
- Common Names
- carp, fancy carp, koi, mirror carp; common carp;
- Bioproject
- PRJNA73579
- Biosample
- SAMN03856486
- Accession No.
- GCA_001270105.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- ZF-screens B.V.
- Released Date
- 2023-11-07
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,380,095,472 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 80,028 |
| Scaffold sequence No. | 80,028 |
| Scaffold L50 | 5,709 |
| Scaffold N50 (bp) | 66,838 |
| Scaffold N75 (bp) | 30,634 |
| Scaffold N90 (bp) | 12,050 |
| Contig sequence No. | 427,338 |
| Contig L50 | 51,239 |
| Contig N50 (bp) | 7,872 |
| Unique components No. | 80,028 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 347,310 |
| Ns gap sequence region length (bp) | 18,433,641 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 50485 | 0 | 0 | 0 | 0 | 0 | 50485 |