- Scientific Name
- Anas platyrhynchos
- Common Names
- duck, mallard duck, mallard ducks; mallard; Anas boschas, Anas domesticus, Anas platyrhynchos f. domestica
- Bioproject
- PRJNA46621
- Biosample
- SAMN00011637
- Accession No.
- GCA_000355885.1
- RefSeq Accession No.
- GCF_000355885.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing
- Released Date
- 2023-12-11
- NCBI Released Date
- 2013-04-26
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000355885.1 | GCF_000355885.1 | different | BGI_duck_1.0 | Draft genome in chromosome level | 2013-04-26 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,105,035,747 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 78,487 |
| Scaffold sequence No. | 78,487 |
| Scaffold L50 | 268 |
| Scaffold N50 (bp) | 1,233,631 |
| Scaffold N75 (bp) | 532,024 |
| Scaffold N90 (bp) | 195,458 |
| Contig sequence No. | 227,448 |
| Contig L50 | 11,206 |
| Contig N50 (bp) | 26,114 |
| Unique components No. | 227,448 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 148,961 |
| Ns gap sequence region length (bp) | 35,079,597 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 16627 | 0 | 0 | 0 | 1519 | 0 | 18146 |