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  • Seriola dumerili
  • Sdu_1.0
    • Scientific Name
    Seriola dumerili
    Common Names
    greater amberjack; Caranx dumerili
    Bioproject
    PRJDB5856
    Biosample
    SAMD00083043
    Accession No.
    GCA_002260705.1
    RefSeq Accession No.
    GCF_002260705.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Genomic breeding group, Research Center for Aquatic Breeding, National Research Institute of aquaculture, FRA
    Released Date
    2023-12-11
    NCBI Released Date
    2017-08-03
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_002260705.1 GCF_002260705.1 different Sdu_1.0 Draft genome in chromosome level 2017-08-03 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 677,669,644
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 34,655
    Scaffold sequence No. 34,655
    Scaffold L50 29
    Scaffold N50 (bp) 5,812,906
    Scaffold N75 (bp) 2,179,008
    Scaffold N90 (bp) 894,121
    Contig sequence No. 41,187
    Contig L50 770
    Contig N50 (bp) 249,755
    Unique components No. 34,655
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 6,532
    Ns gap sequence region length (bp) 5,558,255
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 677,686,174
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 34,656
    GC content 41
    Scaffold sequence No. 34,656
    Scaffold L50 29
    Scaffold N50 (bp) 5,812,906
    Scaffold N75 (bp) 2,179,008
    Scaffold N90 (bp) 894,121
    Contig sequence No. 41,188
    Contig L50 771
    Contig N50 (bp) 249,509
    Unique components No. 34,656
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 6,532
    Ns gap sequence region length (bp) 5,558,255
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 22018 1159 2658 299 78 24214