- Scientific Name
- Larimichthys crocea
- Common Names
- croceine croaker; large yellow croaker; Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea
- Bioproject
- PRJNA491413
- Biosample
- SAMN10077518
- Accession No.
- GCA_003711585.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Frasergen bioinfomatics
- Released Date
- 2025-02-23
- NCBI Released Date
- 2019-11-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003711585.2 | - | - | ASM371158v2 | Draft genome in scaffold level | 2019-11-14 | DNA GFF RNA CDS Protein |
| GCA_003711585.1 | - | - | ASM371158v1 | Draft genome in scaffold level | 2018-11-27 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 744,270,469 |
| Chromosomes, organellas and plasmids sequnece No. | 24 |
| Genome sequence No. | 2,698 |
| GC content | 41.5 |
| Scaffold sequence No. | 2,698 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 29,200,035 |
| Scaffold N75 (bp) | 25,643,925 |
| Scaffold N90 (bp) | 21,178,555 |
| Contig sequence No. | 4,085 |
| Contig L50 | 140 |
| Contig N50 (bp) | 1,327,071 |
| Unique components No. | 2,698 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,387 |
| Ns gap sequence region length (bp) | 138,700 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 24283 | 0 | 0 | 0 | 0 | 1116 | 25399 |