logo
Advanced

  • Anas platyrhynchos
  • ZJU1.0
    • Scientific Name
    Anas platyrhynchos
    Common Names
    duck, mallard duck, mallard ducks; mallard; Anas boschas, Anas domesticus, Anas platyrhynchos f. domestica
    Bioproject
    PRJNA636121
    Biosample
    SAMN15588841
    Accession No.
    GCA_015476345.1
    RefSeq Accession No.
    GCF_015476345.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Zhejiang University
    Released Date
    2025-02-23
    NCBI Released Date
    2020-11-23
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_015476345.1 GCF_015476345.1 different ZJU1.0 Draft genome in scaffold level 2020-11-23 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,188,516,685
    Chromosomes, organellas and plasmids sequnece No. 33
    Genome sequence No. 755
    GC content 42.5
    Scaffold sequence No. 755
    Scaffold L50 5
    Scaffold N50 (bp) 76,269,206
    Scaffold N75 (bp) 22,598,276
    Scaffold N90 (bp) 11,966,879
    Contig sequence No. 1,660
    Contig L50 57
    Contig N50 (bp) 5,679,408
    Unique components No. 755
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 905
    Ns gap sequence region length (bp) 4,230,438
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 1,188,533,289
    Chromosomes, organellas and plasmids sequnece No. 34
    Genome sequence No. 756
    GC content 42.5
    Scaffold sequence No. 756
    Scaffold L50 5
    Scaffold N50 (bp) 76,269,206
    Scaffold N75 (bp) 22,598,276
    Scaffold N90 (bp) 11,966,879
    Contig sequence No. 1,661
    Contig L50 57
    Contig N50 (bp) 5,679,408
    Unique components No. 756
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 905
    Ns gap sequence region length (bp) 4,230,438
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 16836 379 357537 243 63 25093