Genome Warehouse

Scientific Name: Anas platyrhynchos
Common Names: duck, mallard duck, mallard ducks; mallard; Anas boschas, Anas domesticus, Anas platyrhynchos f. domestica
Bioproject: PRJNA636121
Biosample: SAMN15588841
Accession No.: GCA_015476345.1
RefSeq Accession No.: GCF_015476345.1
RefSeq vs GenBank similarity: different
Source: NCBI
External Links: NCBI
Submitter Organization: Zhejiang University
Released Date: 2023-12-14
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Download: DNA
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
Publication(s)

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	Release Date	Download Files
GCA_015476345.1	GCF_015476345.1	different	ZJU1.0	Draft genome in scaffold level	2020-11-23	DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

Genome size (bp)	1,188,516,685
Chromosomes, organellas and plasmids sequnece No.	33
Genome sequence No.	755
Scaffold sequence No.	755
Scaffold L50	5
Scaffold N50 (bp)	76,269,206
Scaffold N75 (bp)	22,598,276
Scaffold N90 (bp)	11,966,879
Contig sequence No.	1,660
Contig L50	57
Contig N50 (bp)	5,679,408
Unique components No.	755
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	905
Ns gap sequence region length (bp)	4,230,438
Gaps No. between scaffolds	0

Genome size (bp)	1,188,533,289
Chromosomes, organellas and plasmids sequnece No.	34
Genome sequence No.	756
GC content	42.5
Scaffold sequence No.	756
Scaffold L50	5
Scaffold N50 (bp)	76,269,206
Scaffold N75 (bp)	22,598,276
Scaffold N90 (bp)	11,966,879
Contig sequence No.	1,661
Contig L50	57
Contig N50 (bp)	5,679,408
Unique components No.	756
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	905
Ns gap sequence region length (bp)	4,230,438
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	16836	379	35	7537	243	63	25093