- Scientific Name
- Bufo bufo
- Common Names
- European toad, common European toad; common toad; Rana bufo
- Bioproject
- PRJEB42168
- Biosample
- SAMEA7521636
- Accession No.
- GCA_905171765.1
- RefSeq Accession No.
- GCF_905171765.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Wellcome Sanger Institute
- Released Date
- 2025-02-23
- NCBI Released Date
- 2021-01-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_905171765.1 | GCF_905171765.1 | different | aBufBuf1.1 | Draft genome in scaffold level | 2021-01-28 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 5,044,762,059 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 1,307 |
| GC content | 44.5 |
| Scaffold sequence No. | 1,307 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 635,713,434 |
| Scaffold N75 (bp) | 439,630,435 |
| Scaffold N90 (bp) | 230,778,867 |
| Contig sequence No. | 5,502 |
| Contig L50 | 350 |
| Contig N50 (bp) | 3,959,750 |
| Unique components No. | 1,307 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 4,195 |
| Ns gap sequence region length (bp) | 9,878,231 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 5,044,744,194 |
| Chromosomes, organellas and plasmids sequnece No. | 11 |
| Genome sequence No. | 1,306 |
| GC content | 44.5 |
| Scaffold sequence No. | 1,306 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 635,713,434 |
| Scaffold N75 (bp) | 439,630,435 |
| Scaffold N90 (bp) | 230,778,867 |
| Contig sequence No. | 5,501 |
| Contig L50 | 350 |
| Contig N50 (bp) | 3,959,750 |
| Unique components No. | 1,306 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 4,195 |
| Ns gap sequence region length (bp) | 9,878,231 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 21517 | 3000 | 78 | asse5674 | 2267 | 64 | 32600 |