logo
Advanced

  • Cyprinus carpio
  • ASM1834038v1
    • Scientific Name
    Cyprinus carpio
    Common Names
    carp, fancy carp, koi, mirror carp; common carp;
    Bioproject
    PRJNA682709
    Biosample
    SAMN17005855
    Accession No.
    GCA_018340385.1
    RefSeq Accession No.
    GCF_018340385.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Chinese Academy of Fishery Sciences
    Released Date
    2024-10-02
    NCBI Released Date
    2021-05-12
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_018340385.1 GCF_018340385.1 different ASM1834038v1 Draft genome in scaffold level 2021-05-12 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,680,184,848
    Chromosomes, organellas and plasmids sequnece No. 51
    Genome sequence No. 6,707
    GC content 37
    Scaffold sequence No. 6,707
    Scaffold L50 24
    Scaffold N50 (bp) 29,545,497
    Scaffold N75 (bp) 25,516,351
    Scaffold N90 (bp) 20,763,676
    Contig sequence No. 19,844
    Contig L50 229
    Contig N50 (bp) 1,558,716
    Unique components No. 6,707
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 13,137
    Ns gap sequence region length (bp) 7,971,909
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 1,680,134,903
    Chromosomes, organellas and plasmids sequnece No. 51
    Genome sequence No. 6,701
    GC content 37
    Scaffold sequence No. 6,701
    Scaffold L50 24
    Scaffold N50 (bp) 29,545,497
    Scaffold N75 (bp) 25,516,351
    Scaffold N90 (bp) 20,763,676
    Contig sequence No. 19,838
    Contig L50 229
    Contig N50 (bp) 1,558,716
    Unique components No. 6,701
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 13,137
    Ns gap sequence region length (bp) 7,971,909
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 43531 2027 4127118 6174 322 59584