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  • Streptococcus pseudopneumoniae
  • ASM589034v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA528011
    Biosample
    SAMN11166147
    Accession No.
    GCA_005890345.1
    RefSeq Accession No.
    GCF_005890345.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Karolinska Institutet
    Released Date
    2023-10-25
    NCBI Released Date
    2019-05-30
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_005890345.1 GCF_005890345.1 identical ASM589034v1 Draft genome in chromosome level 2019-05-30 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,227,985
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 86
    GC content 40
    Scaffold sequence No. 86
    Scaffold L50 10
    Scaffold N50 (bp) 77,046
    Scaffold N75 (bp) 41,445
    Scaffold N90 (bp) 19,162
    Contig sequence No. 87
    Contig L50 10
    Contig N50 (bp) 77,046
    Unique components No. 86
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2140 45 7 0 249 3 2444

    Statistics of Genome Assembly

    Genome size (bp) 2,227,985
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 86
    GC content 40
    Scaffold sequence No. 86
    Scaffold L50 10
    Scaffold N50 (bp) 77,046
    Scaffold N75 (bp) 41,445
    Scaffold N90 (bp) 19,162
    Contig sequence No. 87
    Contig L50 10
    Contig N50 (bp) 77,046
    Unique components No. 86
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 100
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2069 45 70 238 3 2362