Genome Warehouse

Scientific Name: Streptococcus pseudopneumoniae
Common Names: -
Bioproject: PRJNA528011
Biosample: SAMN11166157
Accession No.: GCA_005890485.1
RefSeq Accession No.: GCF_005890485.1
RefSeq vs GenBank similarity: identical
Source: NCBI
External Links: NCBI
Submitter Organization: Karolinska Institutet
Released Date: 2024-01-03
NCBI Released Date: 2019-05-30
Assembly Level: Draft genome in contig level
Genome Representation: Full Genome
Download: DNA GFF RNA CDS Protein
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)

History

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	NCBI Released Date	Download Files
GCA_005890485.1	GCF_005890485.1	identical	ASM589048v1	Complete genome	2019-05-30	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

GenBank
RefSeq

Statistics of Genome Assembly

Genome size (bp)	2,209,430
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	186
GC content	40
Contig sequence No.	186
Contig L50	31
Contig N50 (bp)	22,336
Unique components No.	186
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	2083	39	7	0	315	3	2447

Statistics of Genome Assembly

Genome size (bp)	2,209,430
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	186
GC content	40
Contig sequence No.	186
Contig L50	31
Contig N50 (bp)	22,336
Unique components No.	186
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	2009	39	7	0	311	3	2369