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  • Streptococcus pseudopneumoniae
  • ASM589052v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA528011
    Biosample
    SAMN11166149
    Accession No.
    GCA_005890525.1
    RefSeq Accession No.
    GCF_005890525.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Karolinska Institutet
    Released Date
    2024-01-03
    NCBI Released Date
    2019-05-30
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_005890525.1 GCF_005890525.1 identical ASM589052v1 Draft genome in chromosome level 2019-05-30 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,231,296
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 174
    GC content 40
    Scaffold sequence No. 174
    Scaffold L50 24
    Scaffold N50 (bp) 30,735
    Scaffold N75 (bp) 15,928
    Scaffold N90 (bp) 6,494
    Contig sequence No. 175
    Contig L50 24
    Contig N50 (bp) 29,797
    Unique components No. 174
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 162
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2183 46 6 0 237 3 2475

    Statistics of Genome Assembly

    Genome size (bp) 2,231,296
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 174
    GC content 40
    Scaffold sequence No. 174
    Scaffold L50 24
    Scaffold N50 (bp) 30,735
    Scaffold N75 (bp) 15,928
    Scaffold N90 (bp) 6,494
    Contig sequence No. 175
    Contig L50 24
    Contig N50 (bp) 29,797
    Unique components No. 174
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 162
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2130 46 60 247 3 2432