- Scientific Name
- human vaginal metagenome
- Common Names
- -
- Bioproject
- PRJNA288562
- Biosample
- SAMN09866717
- Accession No.
- GCA_003555665.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Stanford University School of Medicine
- Released Date
- 2024-01-30
- NCBI Released Date
- 2018-09-13
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003555665.1 | - | - | ASM355566v1 | Draft genome in chromosome level | 2018-09-13 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 54,110,725 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 28,046 |
| GC content | 43 |
| Scaffold sequence No. | 28,046 |
| Scaffold L50 | 2,717 |
| Scaffold N50 (bp) | 3,336 |
| Scaffold N75 (bp) | 1,181 |
| Scaffold N90 (bp) | 712 |
| Contig sequence No. | 28,161 |
| Contig L50 | 2,743 |
| Contig N50 (bp) | 3,296 |
| Unique components No. | 28,046 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 115 |
| Ns gap sequence region length (bp) | 3,938 |
| Gaps No. between scaffolds | 0 |