- Scientific Name
- human vaginal metagenome
- Common Names
- -
- Bioproject
- PRJNA288562
- Biosample
- SAMN09866714
- Accession No.
- GCA_003555705.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Stanford University School of Medicine
- Released Date
- 2024-01-03
- NCBI Released Date
- 2018-09-13
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003555705.1 | - | - | ASM355570v1 | Draft genome in chromosome level | 2018-09-13 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 11,654,650 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 8,556 |
| GC content | 42.5 |
| Scaffold sequence No. | 8,556 |
| Scaffold L50 | 1,146 |
| Scaffold N50 (bp) | 1,388 |
| Scaffold N75 (bp) | 812 |
| Scaffold N90 (bp) | 615 |
| Contig sequence No. | 8,575 |
| Contig L50 | 1,151 |
| Contig N50 (bp) | 1,383 |
| Unique components No. | 8,556 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 755 |
| Gaps No. between scaffolds | 0 |