- Scientific Name
- Nitrosopumilaceae archaeon
- Common Names
- -
- Bioproject
- PRJNA593905
- Biosample
- SAMN13193029
- Accession No.
- GCA_013330055.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The University of Queensland
- Released Date
- 2025-04-30
- NCBI Released Date
- 2020-06-11
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,184,172 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 86 |
| GC content | 36 |
| Scaffold sequence No. | 86 |
| Scaffold L50 | 15 |
| Scaffold N50 (bp) | 25,835 |
| Scaffold N75 (bp) | 10,814 |
| Scaffold N90 (bp) | 5,537 |
| Contig sequence No. | 117 |
| Contig L50 | 20 |
| Contig N50 (bp) | 19,566 |
| Unique components No. | 86 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 31 |
| Ns gap sequence region length (bp) | 2,053 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1380 | 33 | 1 | 0 | 131 | 2 | 1547 |