- Scientific Name
- Nitrosopumilaceae archaeon
- Common Names
- -
- Bioproject
- PRJNA592041
- Biosample
- SAMN14996549
- Accession No.
- GCA_013867335.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- the hong kong university of science and technology
- Released Date
- 2025-04-30
- NCBI Released Date
- 2020-07-28
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,460,734 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 184 |
| GC content | 35 |
| Scaffold sequence No. | 184 |
| Scaffold L50 | 29 |
| Scaffold N50 (bp) | 15,420 |
| Scaffold N75 (bp) | 7,504 |
| Scaffold N90 (bp) | 3,781 |
| Contig sequence No. | 200 |
| Contig L50 | 31 |
| Contig N50 (bp) | 14,624 |
| Unique components No. | 184 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 16 |
| Ns gap sequence region length (bp) | 1,420 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1823 | 40 | 5 | 0 | 12 | 2 | 1882 |