- Scientific Name
- Nitrosopumilaceae archaeon
- Common Names
- -
- Bioproject
- PRJDB6644
- Biosample
- SAMD00166099
- Accession No.
- GCA_014193235.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Center for Ecological Research, Kyoto University
- Released Date
- 2025-04-30
- NCBI Released Date
- 2019-05-29
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,349,831 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 89 |
| GC content | 33 |
| Scaffold sequence No. | 89 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 32,493 |
| Scaffold N75 (bp) | 12,327 |
| Scaffold N90 (bp) | 5,855 |
| Contig sequence No. | 96 |
| Contig L50 | 11 |
| Contig N50 (bp) | 30,676 |
| Unique components No. | 89 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 7 |
| Ns gap sequence region length (bp) | 4,062 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1533 | 36 | 3 | 0 | 0 | 0 | 1572 |