- Scientific Name
- Oryza rufipogon
- Common Names
- common wild rice, red rice;
- Bioproject
- PRJNA243646
- Biosample
- SAMN02721168
- Accession No.
- GCA_000700045.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Arizona
- Released Date
- 2025-02-23
- NCBI Released Date
- 2014-06-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000700045.1 | - | - | O. rufipogon chromosome 3 short arm | Draft genome in scaffold level | 2014-06-11 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 12,740,948 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 42.5 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 12,740,948 |
| Scaffold N75 (bp) | 12,740,948 |
| Scaffold N90 (bp) | 12,740,948 |
| Contig sequence No. | 2,921 |
| Contig L50 | 442 |
| Contig N50 (bp) | 8,084 |
| Unique components No. | 2,921 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2,920 |
| Ns gap sequence region length (bp) | 292,000 |
| Gaps No. between scaffolds | 0 |