- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA41343
- Biosample
- SAMD00036540
- Accession No.
- GCA_000181095.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Kazusa DNA Research Institute
- Released Date
- 2023-11-07
- NCBI Released Date
- 2009-11-13
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000181095.1 | - | - | ASM18109v1 | Draft genome in chromosome level | 2009-11-13 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 540,588,968 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 100,783 |
| Scaffold sequence No. | 100,783 |
| Scaffold L50 | 13,990 |
| Scaffold N50 (bp) | 9,735 |
| Scaffold N75 (bp) | 4,280 |
| Scaffold N90 (bp) | 1,954 |
| Contig sequence No. | 100,813 |
| Contig L50 | 13,987 |
| Contig N50 (bp) | 9,735 |
| Unique components No. | 100,783 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 30 |
| Ns gap sequence region length (bp) | 2,614 |
| Gaps No. between scaffolds | 0 |