- Scientific Name
- Glycine soja
- Common Names
- wild soybean; Glycine max subsp. soja
- Bioproject
- PRJNA223435
- Biosample
- SAMN02905861
- Accession No.
- GCA_000722935.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The Chinese University of Hong Kong
- Released Date
- 2023-10-25
- NCBI Released Date
- 2014-12-17
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000722935.2 | - | - | W05v1.0 | Draft genome in chromosome level | 2014-12-17 | DNA GFF RNA CDS Protein |
| GCA_000722935.1 | - | - | W05v1.0 | Complete genome | 2014-07-07 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 863,568,428 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 33,170 |
| GC content | 33.5 |
| Scaffold sequence No. | 33,170 |
| Scaffold L50 | 437 |
| Scaffold N50 (bp) | 404,776 |
| Scaffold N75 (bp) | 121,658 |
| Scaffold N90 (bp) | 44,958 |
| Contig sequence No. | 128,699 |
| Contig L50 | 8,861 |
| Contig N50 (bp) | 24,258 |
| Unique components No. | 128,699 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 95,529 |
| Ns gap sequence region length (bp) | 56,647,238 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 50399 | 0 | 0 | 0 | 0 | 0 | 50399 |