- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA67471
- Biosample
- SAMN02981358
- Accession No.
- GCA_000325825.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Mitochondrial Genome
- Released Date
- 2025-02-23
- NCBI Released Date
- 2012-02-24
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Mitochondrion )
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000325825.1 | - | - | S_lycopersicum_mitochondrion_v1.5 | Draft genome in chromosome level | 2012-02-24 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 575,198 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 195 |
| GC content | 43.5 |
| Scaffold sequence No. | 195 |
| Scaffold L50 | 18 |
| Scaffold N50 (bp) | 7,789 |
| Scaffold N75 (bp) | 2,452 |
| Scaffold N90 (bp) | 1,001 |
| Contig sequence No. | 200 |
| Contig L50 | 18 |
| Contig N50 (bp) | 7,789 |
| Unique components No. | 195 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 134 |
| Gaps No. between scaffolds | 0 |