- Scientific Name
- Oryza longistaminata
- Common Names
- long-staminate rice, red rice;
- Bioproject
- PRJNA293398
- Biosample
- SAMN03996572
- Accession No.
- GCA_001514335.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Kunming Institute of Zoology, Chinese Academy of Science
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-01-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001514335.2 | - | - | ASM151433v2 | Draft genome in scaffold level | 2016-01-21 | DNA |
| GCA_001514335.1 | - | - | ASM151433v1 | Draft genome in chromosome level | 2016-01-13 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 362,063,720 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 9,688 |
| Scaffold sequence No. | 11,745 |
| Scaffold L50 | 305 |
| Scaffold N50 (bp) | 363,864 |
| Scaffold N75 (bp) | 174,365 |
| Scaffold N90 (bp) | 64,429 |
| Contig sequence No. | 26,322 |
| Contig L50 | 2,499 |
| Contig N50 (bp) | 39,115 |
| Unique components No. | 11,745 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 14,577 |
| Ns gap sequence region length (bp) | 20,309,678 |
| Gaps No. between scaffolds | 2,057 |