- Scientific Name
- Setaria italica
- Common Names
- foxtail millet; Chaetochloa italica, Panicum italicum, Pennisetum macrochaetum, Setaria viridis subsp. italica
- Bioproject
- PRJNA314430
- Biosample
- SAMN04534922
- Accession No.
- GCA_001652605.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Academia Sinica
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-05-26
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001652605.1 | - | - | ASM165260v1 | Draft genome in scaffold level | 2016-05-26 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 477,541,705 |
| Chromosomes, organellas and plasmids sequnece No. | 9 |
| Genome sequence No. | 2,689 |
| Scaffold sequence No. | 2,689 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 53,212,001 |
| Scaffold N75 (bp) | 42,684,089 |
| Scaffold N90 (bp) | 39,546,705 |
| Contig sequence No. | 17,095 |
| Contig L50 | 833 |
| Contig N50 (bp) | 147,520 |
| Unique components No. | 2,689 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 14,406 |
| Ns gap sequence region length (bp) | 13,668,368 |
| Gaps No. between scaffolds | 0 |