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  • Hevea brasiliensis
  • ASM165405v1
    • Scientific Name
    Hevea brasiliensis
    Common Names
    jebe, Para rubber tree, siringa; rubber tree;
    Bioproject
    PRJNA310386
    Biosample
    SAMN04451765
    Accession No.
    GCA_001654055.1
    RefSeq Accession No.
    GCF_001654055.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Rubber Research Institute
    Released Date
    2025-01-12
    NCBI Released Date
    2016-06-01
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001654055.1 GCF_001654055.1 different ASM165405v1 Draft genome in chromosome level 2016-06-01 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,373,365,927
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 7,452
    GC content 35
    Scaffold sequence No. 7,452
    Scaffold L50 320
    Scaffold N50 (bp) 1,281,786
    Scaffold N75 (bp) 645,062
    Scaffold N90 (bp) 218,446
    Contig sequence No. 48,314
    Contig L50 6,073
    Contig N50 (bp) 60,036
    Unique components No. 7,452
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 40,862
    Ns gap sequence region length (bp) 79,796,327
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 1,373,527,118
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 7,453
    GC content 35
    Scaffold sequence No. 7,453
    Scaffold L50 320
    Scaffold N50 (bp) 1,281,786
    Scaffold N75 (bp) 645,062
    Scaffold N90 (bp) 218,446
    Contig sequence No. 48,315
    Contig L50 6,073
    Contig N50 (bp) 60,046
    Unique components No. 7,453
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 40,862
    Ns gap sequence region length (bp) 79,796,327
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 35267 592 82529 4290 0 42686