- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJEB6302
- Biosample
- SAMEA3283147
- Accession No.
- GCA_900008105.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- RWTH Aachen
- Released Date
- 2023-10-30
- NCBI Released Date
- 2014-07-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_900008105.1 | - | - | V100 | Draft genome in scaffold level | 2014-07-11 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 760,067,366 |
| Chromosomes, organellas and plasmids sequnece No. | 13 |
| Genome sequence No. | 13 |
| GC content | 34 |
| Scaffold sequence No. | 13 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 64,845,585 |
| Scaffold N75 (bp) | 63,035,830 |
| Scaffold N90 (bp) | 49,921,527 |
| Contig sequence No. | 22,240 |
| Contig L50 | 1,909 |
| Contig N50 (bp) | 89,767 |
| Unique components No. | 13 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 22,227 |
| Ns gap sequence region length (bp) | 40,887,575 |
| Gaps No. between scaffolds | 0 |