- Scientific Name
- Oryza sativa Indica Group
- Common Names
- Indian rice, Indica rice; long-grained rice; Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa subsp. indica
- Bioproject
- PRJNA353946
- Biosample
- SAMN06031001
- Accession No.
- GCA_001889745.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The University of Arizona
- Released Date
- 2023-10-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001889745.1 | - | - | Rice_IR8_v1.7 | Draft genome in chromosome level | 2016-12-06 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 389,088,367 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 15 |
| Scaffold sequence No. | 66 |
| Scaffold L50 | 11 |
| Scaffold N50 (bp) | 14,564,657 |
| Scaffold N75 (bp) | 6,240,730 |
| Scaffold N90 (bp) | 3,258,227 |
| Contig sequence No. | 67 |
| Contig L50 | 11 |
| Contig N50 (bp) | 14,564,657 |
| Unique components No. | 66 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1 |
| Ns gap sequence region length (bp) | 6,210 |
| Gaps No. between scaffolds | 62 |