- Scientific Name
- Secale cereale
- Common Names
- rye; Secale cereale subsp. cereale
- Bioproject
- PRJEB13501
- Biosample
- SAMEA3928734
- Accession No.
- GCA_900079665.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- IPK-Gatersleben
- Released Date
- 2023-12-26
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_900079665.1 | - | - | Rye_Lo7_WGS_contigs | Draft genome in chromosome level | 2017-02-07 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 1,684,931,674 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,581,707 |
| Scaffold sequence No. | 1,581,707 |
| Scaffold L50 | 233,831 |
| Scaffold N50 (bp) | 1,708 |
| Scaffold N75 (bp) | 705 |
| Scaffold N90 (bp) | 416 |
| Contig sequence No. | 2,277,903 |
| Contig L50 | 261,060 |
| Contig N50 (bp) | 1,474 |
| Unique components No. | 1,581,707 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 696,196 |
| Ns gap sequence region length (bp) | 12,880,831 |
| Gaps No. between scaffolds | 0 |