- Scientific Name
- Oryza sativa Indica Group
- Common Names
- Indian rice, Indica rice; long-grained rice; Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa subsp. indica
- Bioproject
- PRJNA318714
- Biosample
- SAMN04866660
- Accession No.
- GCA_002151415.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Institute of Genetics and Developmental Biology Chinese Academy of Sciences
- Released Date
- 2025-02-23
- NCBI Released Date
- 2017-05-04
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002151415.1 | - | - | R498.Genome.version1 | Draft genome in scaffold level | 2017-05-04 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 390,983,850 |
| Chromosomes, organellas and plasmids sequnece No. | 14 |
| Genome sequence No. | 14 |
| Scaffold sequence No. | 14 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 31,778,392 |
| Scaffold N75 (bp) | 29,952,003 |
| Scaffold N90 (bp) | 25,582,588 |
| Contig sequence No. | 19 |
| Contig L50 | 7 |
| Contig N50 (bp) | 25,582,588 |
| Unique components No. | 14 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 50,000 |
| Gaps No. between scaffolds | 0 |