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  • Brassica napus
  • Bra_napus_v2.0
    • Scientific Name
    Brassica napus
    Common Names
    oilseed rape, rapeseeds; rape;
    Bioproject
    PRJNA237736
    Biosample
    SAMN02742820
    Accession No.
    GCA_000686985.2
    RefSeq Accession No.
    GCF_000686985.2
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    BGI-Shenzhen
    Released Date
    2025-01-12
    NCBI Released Date
    2017-09-15
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_000686985.2 GCF_000686985.2 different Bra_napus_v2.0 Draft genome in scaffold level 2017-09-15 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_000686985.1 GCF_000686985.1 different Brassica_napus_assembly_v1.0 Draft genome in scaffold level 2014-05-15 DNA GFF
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 975,804,240
    Chromosomes, organellas and plasmids sequnece No. 19
    Genome sequence No. 1,468
    GC content 36.5
    Scaffold sequence No. 1,468
    Scaffold L50 9
    Scaffold N50 (bp) 45,943,547
    Scaffold N75 (bp) 31,473,442
    Scaffold N90 (bp) 485,237
    Contig sequence No. 34,107
    Contig L50 4,852
    Contig N50 (bp) 55,410
    Unique components No. 34,107
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 32,639
    Ns gap sequence region length (bp) 68,842,306
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 976,190,593
    Chromosomes, organellas and plasmids sequnece No. 22
    Genome sequence No. 1,471
    GC content 36.5
    Scaffold sequence No. 1,471
    Scaffold L50 9
    Scaffold N50 (bp) 45,943,547
    Scaffold N75 (bp) 31,473,442
    Scaffold N90 (bp) 485,073
    Contig sequence No. 34,110
    Contig L50 4,850
    Contig N50 (bp) 55,443
    Unique components No. 34,110
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 32,639
    Ns gap sequence region length (bp) 68,842,306
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 96974 2444 1110217 9886 1 119533