- Scientific Name
- Brassica napus
- Common Names
- oilseed rape, rapeseeds; rape;
- Bioproject
- PRJNA237736
- Biosample
- SAMN02742820
- Accession No.
- GCA_000686985.2
- RefSeq Accession No.
- GCF_000686985.2
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- BGI-Shenzhen
- Released Date
- 2023-12-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000686985.2 | GCF_000686985.2 | different | Bra_napus_v2.0 | Draft genome in chromosome level | 2017-09-15 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 975,804,240 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 1,468 |
| Scaffold sequence No. | 1,468 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 45,943,547 |
| Scaffold N75 (bp) | 31,473,442 |
| Scaffold N90 (bp) | 485,237 |
| Contig sequence No. | 34,107 |
| Contig L50 | 4,852 |
| Contig N50 (bp) | 55,410 |
| Unique components No. | 34,107 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 32,639 |
| Ns gap sequence region length (bp) | 68,842,306 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 976,190,593 |
| Chromosomes, organellas and plasmids sequnece No. | 22 |
| Genome sequence No. | 1,471 |
| GC content | 36.5 |
| Scaffold sequence No. | 1,471 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 45,943,547 |
| Scaffold N75 (bp) | 31,473,442 |
| Scaffold N90 (bp) | 485,073 |
| Contig sequence No. | 34,110 |
| Contig L50 | 4,850 |
| Contig N50 (bp) | 55,443 |
| Unique components No. | 34,110 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 32,639 |
| Ns gap sequence region length (bp) | 68,842,306 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 96974 | 2444 | 11 | asse10217 | 9886 | 1 | 119533 |