- Scientific Name
- Capsicum baccatum
- Common Names
- -
- Bioproject
- PRJNA308879
- Biosample
- SAMN04417068
- Accession No.
- GCA_002271885.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Seoul National University
- Released Date
- 2025-02-23
- NCBI Released Date
- 2017-10-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002271885.2 | - | - | ASM227188v2 | Draft genome in scaffold level | 2017-10-30 | DNA GFF RNA CDS Protein |
| GCA_002271885.1 | - | - | ASM227188v1 | Draft genome in chromosome level | 2017-08-16 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 3,215,610,539 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 23,260 |
| GC content | 35.5 |
| Scaffold sequence No. | 23,260 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 229,738,584 |
| Scaffold N75 (bp) | 210,184,557 |
| Scaffold N90 (bp) | 1,373,364 |
| Contig sequence No. | 177,021 |
| Contig L50 | 13,720 |
| Contig N50 (bp) | 57,876 |
| Unique components No. | 23,260 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 153,761 |
| Ns gap sequence region length (bp) | 110,554,234 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 35853 | 0 | 0 | 0 | 0 | 0 | 35853 |