- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA413174
- Biosample
- SAMN07737832
- Accession No.
- GCA_002954035.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Boyce Thompson Institute
- Released Date
- 2023-10-31
- NCBI Released Date
- 2017-11-03
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002954035.1 | - | - | ASM295403v1 | Draft genome in scaffold level | 2017-11-03 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 824,010,332 |
| Chromosomes, organellas and plasmids sequnece No. | 13 |
| Genome sequence No. | 13 |
| Scaffold sequence No. | 13 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 66,477,049 |
| Scaffold N75 (bp) | 65,532,080 |
| Scaffold N90 (bp) | 55,344,765 |
| Contig sequence No. | 26,879 |
| Contig L50 | 2,009 |
| Contig N50 (bp) | 86,941 |
| Unique components No. | 13 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 26,866 |
| Ns gap sequence region length (bp) | 86,345,924 |
| Gaps No. between scaffolds | 0 |