- Scientific Name
- Arabidopsis thaliana
- Common Names
- mouse-ear cress, thale-cress; thale cress; Arabis thaliana
- Bioproject
- PRJNA302255
- Biosample
- SAMN04270984
- Accession No.
- GCA_001742845.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Bielefeld University, CeBiTec & Department of Biology
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-09-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001742845.1 | - | - | AthNd1_v1.0 | Draft genome in chromosome level | 2016-09-23 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 116,846,015 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 5,197 |
| Scaffold sequence No. | 5,197 |
| Scaffold L50 | 49 |
| Scaffold N50 (bp) | 589,639 |
| Scaffold N75 (bp) | 174,007 |
| Scaffold N90 (bp) | 40,994 |
| Contig sequence No. | 6,358 |
| Contig L50 | 174 |
| Contig N50 (bp) | 185,555 |
| Unique components No. | 6,358 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,161 |
| Ns gap sequence region length (bp) | 1,216,628 |
| Gaps No. between scaffolds | 0 |