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  • Brassica rapa
  • Brassica_rapa_FPsc_v1.3
    • Scientific Name
    Brassica rapa
    Common Names
    field mustard;
    Bioproject
    PRJNA41163
    Biosample
    SAMN00004054
    Accession No.
    GCA_003434825.1
    RefSeq Accession No.
    -
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    JGI
    Released Date
    2023-10-23
    NCBI Released Date
    2018-09-13
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    -
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_003434825.1 - - Brassica_rapa_FPsc_v1.3 Draft genome in scaffold level 2018-09-13 DNA GFF RNA CDS Protein

    Statistics of Genome Assembly

    Genome size (bp) 314,865,497
    Chromosomes, organellas and plasmids sequnece No. 10
    Genome sequence No. 5,645
    GC content 35
    Scaffold sequence No. 7,071
    Scaffold L50 167
    Scaffold N50 (bp) 478,658
    Scaffold N75 (bp) 195,157
    Scaffold N90 (bp) 67,229
    Contig sequence No. 43,858
    Contig L50 4,148
    Contig N50 (bp) 17,500
    Unique components No. 40,430
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 36,787
    Ns gap sequence region length (bp) 64,845,872
    Gaps No. between scaffolds 1,426
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 40454 0 0 0 0 0 40454