- Scientific Name
- Panicum miliaceum
- Common Names
- broom millet, common millet, proso millet;
- Bioproject
- PRJNA431363
- Biosample
- SAMN08389585
- Accession No.
- GCA_003046395.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Shanghai Center for Plant Stress Biology
- Released Date
- 2023-11-07
- NCBI Released Date
- 2018-10-25
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003046395.2 | - | - | Pm_0390_v2 | Draft genome in scaffold level | 2018-10-25 | DNA GFF RNA CDS Protein |
| GCA_003046395.1 | - | - | Pm_0390_v1 | Draft genome in scaffold level | 2018-04-10 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 854,793,052 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 1,306 |
| Scaffold sequence No. | 1,306 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 46,661,915 |
| Scaffold N75 (bp) | 39,901,388 |
| Scaffold N90 (bp) | 32,167,407 |
| Contig sequence No. | 5,537 |
| Contig L50 | 423 |
| Contig N50 (bp) | 368,640 |
| Unique components No. | 1,306 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 4,231 |
| Ns gap sequence region length (bp) | 16,924,000 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 55964 | 39 | 8 | 0 | 0 | 0 | 56011 |