- Scientific Name
- Oryza sativa Indica Group
- Common Names
- Indian rice, Indica rice; long-grained rice; Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa subsp. indica
- Bioproject
- PRJNA533186
- Biosample
- SAMN11445093
- Accession No.
- GCA_006992885.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Fujian Agriculture and Forest University
- Released Date
- 2023-11-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_006992885.1 | - | - | ASM699288v1 | Draft genome in scaffold level | 2019-07-15 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 281,326,210 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 91,264 |
| Scaffold sequence No. | 91,264 |
| Scaffold L50 | 10,755 |
| Scaffold N50 (bp) | 7,460 |
| Scaffold N75 (bp) | 3,543 |
| Scaffold N90 (bp) | 1,437 |
| Contig sequence No. | 113,132 |
| Contig L50 | 12,440 |
| Contig N50 (bp) | 6,367 |
| Unique components No. | 91,264 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 21,868 |
| Ns gap sequence region length (bp) | 1,940,251 |
| Gaps No. between scaffolds | 0 |