- Scientific Name
- Cocos nucifera
- Common Names
- coconut palm;
- Bioproject
- PRJNA374600
- Biosample
- SAMN06328965
- Accession No.
- GCA_008124465.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Hainan Key Laboratory of Tropical Oil Crops Biology /Coconut Research Institute
- Released Date
- 2024-09-19
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 2,202,455,121 |
| Chromosomes, organellas and plasmids sequnece No. | 16 |
| Genome sequence No. | 111,366 |
| GC content | 37.5 |
| Scaffold sequence No. | 113,653 |
| Scaffold L50 | 1,155 |
| Scaffold N50 (bp) | 419,186 |
| Scaffold N75 (bp) | 132,759 |
| Scaffold N90 (bp) | 31,961 |
| Contig sequence No. | 162,060 |
| Contig L50 | 7,503 |
| Contig N50 (bp) | 76,122 |
| Unique components No. | 113,653 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 48,407 |
| Ns gap sequence region length (bp) | 55,238,351 |
| Gaps No. between scaffolds | 2,287 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 28016 | 0 | 0 | 0 | 0 | 0 | 28016 |