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  • Pistacia vera
  • PisVer_v2
    • Scientific Name
    Pistacia vera
    Common Names
    pistachio;
    Bioproject
    PRJNA526975
    Biosample
    SAMN11269074
    Accession No.
    GCA_008641045.1
    RefSeq Accession No.
    GCF_008641045.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Chinese Academy of Sciences
    Released Date
    2025-02-23
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_008641045.1 GCF_008641045.1 different PisVer_v2 Draft genome in chromosome level 2019-09-23 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 671,152,441
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 1,888
    GC content 36
    Scaffold sequence No. 1,888
    Scaffold L50 217
    Scaffold N50 (bp) 949,204
    Scaffold N75 (bp) 507,168
    Scaffold N90 (bp) 263,530
    Contig sequence No. 2,350
    Contig L50 282
    Contig N50 (bp) 714,252
    Unique components No. 1,888
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 462
    Ns gap sequence region length (bp) 1,059,236
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 671,280,010
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 1,865
    GC content 36
    Scaffold sequence No. 1,865
    Scaffold L50 218
    Scaffold N50 (bp) 948,305
    Scaffold N75 (bp) 507,168
    Scaffold N90 (bp) 263,530
    Contig sequence No. 2,327
    Contig L50 282
    Contig N50 (bp) 714,252
    Unique components No. 1,865
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 462
    Ns gap sequence region length (bp) 1,059,236
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 32030 623 313978 5689 0 42351