- Scientific Name
- Benincasa hispida
- Common Names
- ash gourd, winter melon; wax gourd; Benincasa cerifera, Benincasa pruriens, Cucurbita hispida, Lagenaria siceraria var. hispida
- Bioproject
- PRJNA430006
- Biosample
- SAMN08364809
- Accession No.
- GCA_009727055.1
- RefSeq Accession No.
- GCF_009727055.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Chinese Academy of Agricultural Sciences
- Released Date
- 2023-12-13
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_009727055.1 | GCF_009727055.1 | identical | ASM972705v1 | Draft genome in chromosome level | 2019-12-03 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 912,951,219 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 1,791 |
| Scaffold sequence No. | 1,791 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 69,945,952 |
| Scaffold N75 (bp) | 62,154,845 |
| Scaffold N90 (bp) | 51,948,642 |
| Contig sequence No. | 14,936 |
| Contig L50 | 1,889 |
| Contig N50 (bp) | 144,985 |
| Unique components No. | 1,791 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 13,145 |
| Ns gap sequence region length (bp) | 14,764,454 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 912,951,219 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 1,791 |
| GC content | 35 |
| Scaffold sequence No. | 1,791 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 69,945,952 |
| Scaffold N75 (bp) | 62,154,845 |
| Scaffold N90 (bp) | 51,948,642 |
| Contig sequence No. | 14,936 |
| Contig L50 | 1,889 |
| Contig N50 (bp) | 144,985 |
| Unique components No. | 1,791 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 13,145 |
| Ns gap sequence region length (bp) | 14,764,454 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 21004 | 733 | 27 | asse3229 | 1075 | 0 | 26068 |