- Scientific Name
- Oryza meyeriana var. granulata
- Common Names
- Oryza granulata
- Bioproject
- PRJNA527807
- Biosample
- SAMN11160423
- Accession No.
- GCA_005223365.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- South China Agricultural University
- Released Date
- 2023-10-23
- NCBI Released Date
- 2020-01-14
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_005223365.2 | - | - | ASM522336v2 | Draft genome in chromosome level | 2020-01-14 | DNA GFF RNA CDS Protein |
| GCA_005223365.1 | - | - | ASM522336v1 | Draft genome in chromosome level | 2019-05-07 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 736,774,741 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,136 |
| GC content | 46 |
| Scaffold sequence No. | 1,136 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 64,488,131 |
| Scaffold N75 (bp) | 54,629,218 |
| Scaffold N90 (bp) | 44,217,632 |
| Contig sequence No. | 19,058 |
| Contig L50 | 2,908 |
| Contig N50 (bp) | 74,130 |
| Unique components No. | 1,136 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 17,922 |
| Ns gap sequence region length (bp) | 26,342,911 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 39549 | 0 | 0 | 0 | 0 | 0 | 39549 |