- Scientific Name
- Ziziphus jujuba
- Common Names
- Chinese jujube, zao; common jujube; Rhamnus zizyphus
- Bioproject
- PRJNA306374
- Biosample
- SAMN04349627
- Accession No.
- GCA_001835785.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Jujube genome sequencing
- Released Date
- 2025-02-23
- NCBI Released Date
- 2020-02-05
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001835785.2 | - | - | NAFU_Zjuj_v2.0 | Draft genome in scaffold level | 2020-02-05 | DNA |
| GCA_001835785.1 | - | - | ASM183578v1 | Draft genome in chromosome level | 2016-10-24 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 362,583,438 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 47 |
| GC content | 33 |
| Scaffold sequence No. | 155 |
| Scaffold L50 | 32 |
| Scaffold N50 (bp) | 4,375,035 |
| Scaffold N75 (bp) | 2,181,270 |
| Scaffold N90 (bp) | 1,132,689 |
| Contig sequence No. | 269 |
| Contig L50 | 53 |
| Contig N50 (bp) | 2,172,811 |
| Unique components No. | 155 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 114 |
| Ns gap sequence region length (bp) | 328,585 |
| Gaps No. between scaffolds | 108 |