- Scientific Name
- Avicennia marina subsp. marina
- Common Names
- Avicennia marina var. marina
- Bioproject
- PRJEB8422
- Biosample
- SAMEA103941920
- Accession No.
- GCA_900174615.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Zhang Zhang
- Released Date
- 2023-10-31
- NCBI Released Date
- 2020-03-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_900174615.1 | - | - | Ama_scaffold_v2 | Draft genome in chromosome level | 2020-03-09 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 458,310,972 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 421 |
| Scaffold sequence No. | 421 |
| Scaffold L50 | 60 |
| Scaffold N50 (bp) | 2,339,679 |
| Scaffold N75 (bp) | 1,263,670 |
| Scaffold N90 (bp) | 662,220 |
| Contig sequence No. | 451 |
| Contig L50 | 63 |
| Contig N50 (bp) | 2,226,468 |
| Unique components No. | 421 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 30 |
| Ns gap sequence region length (bp) | 28,899 |
| Gaps No. between scaffolds | 0 |