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  • Cannabis sativa
  • cs10
    • Scientific Name
    Cannabis sativa
    Common Names
    -
    Bioproject
    PRJEB29284
    Biosample
    SAMEA5040675
    Accession No.
    GCA_900626175.2
    RefSeq Accession No.
    GCF_900626175.2
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    HARVARD OEB
    Released Date
    2025-01-13
    NCBI Released Date
    2019-02-14
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_900626175.2 GCF_900626175.2 different cs10 Draft genome in scaffold level 2019-02-14 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_900626175.1 GCF_900626175.1 different cs10 Draft genome in scaffold level 2019-02-14 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 875,732,047
    Chromosomes, organellas and plasmids sequnece No. 10
    Genome sequence No. 220
    GC content 33.5
    Scaffold sequence No. 220
    Scaffold L50 5
    Scaffold N50 (bp) 91,912,889
    Scaffold N75 (bp) 71,237,084
    Scaffold N90 (bp) 64,621,186
    Contig sequence No. 1,051
    Contig L50 102
    Contig N50 (bp) 1,959,202
    Unique components No. 1,051
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 833
    Ns gap sequence region length (bp) 139,568,290
    Gaps No. between scaffolds 10

    Statistics of Genome Assembly

    Genome size (bp) 876,147,649
    Chromosomes, organellas and plasmids sequnece No. 11
    Genome sequence No. 221
    GC content 33.5
    Scaffold sequence No. 221
    Scaffold L50 5
    Scaffold N50 (bp) 91,912,889
    Scaffold N75 (bp) 71,237,084
    Scaffold N90 (bp) 64,621,186
    Contig sequence No. 1,052
    Contig L50 102
    Contig N50 (bp) 1,959,202
    Unique components No. 1,052
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 833
    Ns gap sequence region length (bp) 139,568,290
    Gaps No. between scaffolds 10
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 25296 491 174003 1363 0 31170