- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA553986
- Biosample
- SAMN12253553
- Accession No.
- GCA_012431665.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- INPT
- Released Date
- 2023-11-16
- NCBI Released Date
- 2020-04-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_012431665.1 | - | - | SLYMIC | Draft genome in scaffold level | 2020-04-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 812,994,249 |
| Chromosomes, organellas and plasmids sequnece No. | 13 |
| Genome sequence No. | 391 |
| GC content | 34.5 |
| Scaffold sequence No. | 391 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 65,982,409 |
| Scaffold N75 (bp) | 63,465,527 |
| Scaffold N90 (bp) | 56,289,049 |
| Contig sequence No. | 1,713 |
| Contig L50 | 67 |
| Contig N50 (bp) | 3,383,282 |
| Unique components No. | 391 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,322 |
| Ns gap sequence region length (bp) | 18,781,567 |
| Gaps No. between scaffolds | 0 |