- Scientific Name
- Avicennia marina subsp. marina
- Common Names
- Avicennia marina var. marina
- Bioproject
- PRJNA629068
- Biosample
- SAMN14766548
- Accession No.
- GCA_013168755.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- New York University Abu Dhabi
- Released Date
- 2023-11-01
- NCBI Released Date
- 2020-05-26
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_013168755.1 | - | - | CGSB_Amar_1.0 | Draft genome in scaffold level | 2020-05-26 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 456,541,723 |
| Chromosomes, organellas and plasmids sequnece No. | 33 |
| Genome sequence No. | 3,792 |
| Scaffold sequence No. | 3,792 |
| Scaffold L50 | 15 |
| Scaffold N50 (bp) | 13,979,447 |
| Scaffold N75 (bp) | 12,283,235 |
| Scaffold N90 (bp) | 11,144,373 |
| Contig sequence No. | 90,068 |
| Contig L50 | 12,767 |
| Contig N50 (bp) | 8,766 |
| Unique components No. | 3,792 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 86,276 |
| Ns gap sequence region length (bp) | 48,573,028 |
| Gaps No. between scaffolds | 0 |