- Scientific Name
- Vigna unguiculata
- Common Names
- cowpea; Phaseolus unguiculatus
- Bioproject
- PRJNA454850
- Biosample
- SAMN09062403
- Accession No.
- GCA_003958685.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Northwestern Polytechnical University
- Released Date
- 2023-11-20
- NCBI Released Date
- 2019-04-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003958685.2 | - | - | ASM395868v2 | Draft genome in scaffold level | 2019-04-30 | DNA GFF RNA CDS Protein |
| GCA_003958685.1 | - | - | ASM395868v1 | Draft genome in chromosome level | 2018-12-21 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 597,519,742 |
| Chromosomes, organellas and plasmids sequnece No. | 11 |
| Genome sequence No. | 11 |
| GC content | 33 |
| Scaffold sequence No. | 11 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 53,937,893 |
| Scaffold N75 (bp) | 49,610,475 |
| Scaffold N90 (bp) | 45,383,982 |
| Contig sequence No. | 34,172 |
| Contig L50 | 5,958 |
| Contig N50 (bp) | 26,652 |
| Unique components No. | 11 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 34,161 |
| Ns gap sequence region length (bp) | 77,069,136 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 40574 | 0 | 0 | 0 | 0 | 0 | 40574 |