- Scientific Name
- Oryza barthii
- Common Names
- African wild rice; Oryza breviligulata
- Bioproject
- PRJNA30379
- Biosample
- SAMN02953732
- Accession No.
- GCA_000182155.4
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Oryza Chr3 Short Arm Comparative Sequencing Project
- Released Date
- 2025-02-23
- NCBI Released Date
- 2021-03-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000182155.4 | - | - | ObarRS3 | Draft genome in scaffold level | 2021-03-10 | DNA |
| GCA_000182155.3 | - | - | O.barthii_v1.3 | Draft genome in scaffold level | 2014-05-08 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 347,715,970 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 51 |
| GC content | 43 |
| Scaffold sequence No. | 67 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 14,688,426 |
| Scaffold N75 (bp) | 12,052,834 |
| Scaffold N90 (bp) | 10,030,823 |
| Contig sequence No. | 67 |
| Contig L50 | 10 |
| Contig N50 (bp) | 14,688,426 |
| Unique components No. | 67 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 1,600 |
| Gaps No. between scaffolds | 16 |