- Scientific Name
- Oryza rufipogon
- Common Names
- common wild rice, red rice;
- Bioproject
- PRJEB4137
- Biosample
- SAMEA3158452
- Accession No.
- GCA_000817225.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- National Center for Gene Research, Chinese Academy of Sciences
- Released Date
- 2024-07-06
- NCBI Released Date
- 2014-12-30
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000817225.1 | - | - | OR_W1943 | Draft genome in chromosome level | 2015-01-05 | DNA |
| GCA_000817225.2 | - | - | ASM81722v2 | Draft genome in chromosome level | 2014-12-30 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 339,176,937 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 3,819 |
| GC content | 42.5 |
| Scaffold sequence No. | 3,819 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 27,785,585 |
| Scaffold N75 (bp) | 25,958,679 |
| Scaffold N90 (bp) | 20,731,201 |
| Contig sequence No. | 68,482 |
| Contig L50 | 2,765 |
| Contig N50 (bp) | 34,232 |
| Unique components No. | 68,485 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 64,663 |
| Ns gap sequence region length (bp) | 6,466,300 |
| Gaps No. between scaffolds | 0 |