- Scientific Name
- Brassica napus
- Common Names
- oilseed rape, rapeseeds; rape;
- Bioproject
- PRJNA627442
- Biosample
- SAMN14670173
- Accession No.
- GCA_020379485.1
- RefSeq Accession No.
- GCF_020379485.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- None
- Released Date
- 2023-10-25
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_020379485.1 | GCF_020379485.1 | different | Da-Ae | Draft genome in chromosome level | 2021-10-08 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,001,499,700 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 3,164 |
| GC content | 37 |
| Scaffold sequence No. | 3,164 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 48,209,797 |
| Scaffold N75 (bp) | 28,277,616 |
| Scaffold N90 (bp) | 91,830 |
| Contig sequence No. | 4,004 |
| Contig L50 | 177 |
| Contig N50 (bp) | 1,580,367 |
| Unique components No. | 3,164 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 840 |
| Ns gap sequence region length (bp) | 85,797 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 96440 | 0 | 0 | 0 | 0 | 0 | 96440 |
Statistics of Genome Assembly
| Genome size (bp) | 1,001,886,053 |
| Chromosomes, organellas and plasmids sequnece No. | 22 |
| Genome sequence No. | 3,167 |
| GC content | 37 |
| Scaffold sequence No. | 3,167 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 48,209,797 |
| Scaffold N75 (bp) | 23,154,485 |
| Scaffold N90 (bp) | 91,830 |
| Contig sequence No. | 4,007 |
| Contig L50 | 177 |
| Contig N50 (bp) | 1,580,367 |
| Unique components No. | 3,167 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 840 |
| Ns gap sequence region length (bp) | 85,797 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 90898 | 2600 | 7275 | asse13137 | 9304 | 1 | 123215 |