logo
Advanced

  • Brassica napus
  • Da-Ae
    • Scientific Name
    Brassica napus
    Common Names
    oilseed rape, rapeseeds; rape;
    Bioproject
    PRJNA627442
    Biosample
    SAMN14670173
    Accession No.
    GCA_020379485.1
    RefSeq Accession No.
    GCF_020379485.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    None
    Released Date
    2025-02-23
    NCBI Released Date
    2021-10-08
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_020379485.1 GCF_020379485.1 different Da-Ae Draft genome in scaffold level 2021-10-08 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,001,499,700
    Chromosomes, organellas and plasmids sequnece No. 19
    Genome sequence No. 3,164
    GC content 37
    Scaffold sequence No. 3,164
    Scaffold L50 9
    Scaffold N50 (bp) 48,209,797
    Scaffold N75 (bp) 28,277,616
    Scaffold N90 (bp) 91,830
    Contig sequence No. 4,004
    Contig L50 177
    Contig N50 (bp) 1,580,367
    Unique components No. 3,164
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 840
    Ns gap sequence region length (bp) 85,797
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 96440 0 0 0 0 0 96440

    Statistics of Genome Assembly

    Genome size (bp) 1,001,886,053
    Chromosomes, organellas and plasmids sequnece No. 22
    Genome sequence No. 3,167
    GC content 37
    Scaffold sequence No. 3,167
    Scaffold L50 9
    Scaffold N50 (bp) 48,209,797
    Scaffold N75 (bp) 23,154,485
    Scaffold N90 (bp) 91,830
    Contig sequence No. 4,007
    Contig L50 177
    Contig N50 (bp) 1,580,367
    Unique components No. 3,167
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 840
    Ns gap sequence region length (bp) 85,797
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 90898 2600 727513137 9304 1 123215