- Scientific Name
- Pogostemon cablin
- Common Names
- patchouli; Pogostemon patchouly
- Bioproject
- PRJNA647235
- Biosample
- SAMN15579894
- Accession No.
- GCA_023678885.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Guangzhou University of Chinese Medicine
- Released Date
- 2023-11-04
- NCBI Released Date
- 2022-06-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_023678885.1 | - | - | GZUCM_PCab_1.0 | Draft genome in scaffold level | 2022-06-08 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 1,940,589,172 |
| Chromosomes, organellas and plasmids sequnece No. | 64 |
| Genome sequence No. | 966 |
| GC content | 34.5 |
| Scaffold sequence No. | 966 |
| Scaffold L50 | 27 |
| Scaffold N50 (bp) | 30,325,545 |
| Scaffold N75 (bp) | 24,781,903 |
| Scaffold N90 (bp) | 21,136,850 |
| Contig sequence No. | 1,730 |
| Contig L50 | 79 |
| Contig N50 (bp) | 7,968,678 |
| Unique components No. | 966 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 764 |
| Ns gap sequence region length (bp) | 382,000 |
| Gaps No. between scaffolds | 0 |