- Scientific Name
- Populus trichocarpa
- Common Names
- western balsam poplar; black cottonwood; Populus balsamifera subsp. trichocarpa
- Bioproject
- PRJNA332131
- Biosample
- SAMN11890658
- Accession No.
- GCA_024362645.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DOE Joint Genome Institute
- Released Date
- 2025-02-23
- NCBI Released Date
- 2022-07-25
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 392,256,073 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 25 |
| GC content | 33.5 |
| Scaffold sequence No. | 128 |
| Scaffold L50 | 19 |
| Scaffold N50 (bp) | 7,470,318 |
| Scaffold N75 (bp) | 4,502,544 |
| Scaffold N90 (bp) | 1,846,058 |
| Contig sequence No. | 128 |
| Contig L50 | 19 |
| Contig N50 (bp) | 7,470,318 |
| Unique components No. | 128 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 1,030,000 |
| Gaps No. between scaffolds | 103 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 34700 | 0 | 0 | 0 | 0 | 0 | 34700 |