- Scientific Name
- Nymphaea colorata
- Common Names
- -
- Bioproject
- PRJNA565347
- Biosample
- SAMN12766378
- Accession No.
- GCA_008831285.2
- RefSeq Accession No.
- GCF_008831285.2
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Fujian Agriculture and Forestry University
- Released Date
- 2024-10-02
- NCBI Released Date
- 2022-08-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_008831285.2 | GCF_008831285.2 | different | ASM883128v2 | Draft genome in scaffold level | 2022-08-01 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
| GCA_008831285.1 | GCF_008831285.1 | different | ASM883128v1 | Draft genome in scaffold level | 2019-10-07 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 408,118,238 |
| Chromosomes, organellas and plasmids sequnece No. | 14 |
| Genome sequence No. | 784 |
| GC content | 38.5 |
| Scaffold sequence No. | 784 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 25,516,871 |
| Scaffold N75 (bp) | 24,319,297 |
| Scaffold N90 (bp) | 12,577,093 |
| Contig sequence No. | 1,407 |
| Contig L50 | 45 |
| Contig N50 (bp) | 2,136,418 |
| Unique components No. | 1,407 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 624 |
| Ns gap sequence region length (bp) | 673,104 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 408,895,275 |
| Chromosomes, organellas and plasmids sequnece No. | 16 |
| Genome sequence No. | 786 |
| GC content | 38.5 |
| Scaffold sequence No. | 786 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 25,516,871 |
| Scaffold N75 (bp) | 24,319,297 |
| Scaffold N90 (bp) | 12,577,093 |
| Contig sequence No. | 1,409 |
| Contig L50 | 45 |
| Contig N50 (bp) | 2,136,418 |
| Unique components No. | 1,409 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 624 |
| Ns gap sequence region length (bp) | 673,104 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 20488 | 645 | 678 | asse1676 | 1096 | 0 | 24583 |