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  • Cucumis melo
  • USDA_Cmelo_AY_1.0
    • Scientific Name
    Cucumis melo
    Common Names
    Oriental melon; muskmelon;
    Bioproject
    PRJNA844271
    Biosample
    SAMN29843731
    Accession No.
    GCA_025177605.1
    RefSeq Accession No.
    GCF_025177605.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    USDA-ARS
    Released Date
    2025-02-23
    NCBI Released Date
    2022-09-14
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_025177605.1 GCF_025177605.1 different USDA_Cmelo_AY_1.0 Draft genome in scaffold level 2022-09-14 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 438,252,206
    Chromosomes, organellas and plasmids sequnece No. 12
    Genome sequence No. 1,309
    GC content 36
    Scaffold sequence No. 1,309
    Scaffold L50 7
    Scaffold N50 (bp) 30,457,480
    Scaffold N75 (bp) 26,397,991
    Scaffold N90 (bp) 192,810
    Contig sequence No. 1,548
    Contig L50 14
    Contig N50 (bp) 10,465,369
    Unique components No. 1,309
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 239
    Ns gap sequence region length (bp) 23,900
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 438,408,223
    Chromosomes, organellas and plasmids sequnece No. 13
    Genome sequence No. 1,310
    GC content 36
    Scaffold sequence No. 1,310
    Scaffold L50 7
    Scaffold N50 (bp) 30,457,480
    Scaffold N75 (bp) 26,397,991
    Scaffold N90 (bp) 192,570
    Contig sequence No. 1,549
    Contig L50 14
    Contig N50 (bp) 10,465,369
    Unique components No. 1,310
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 239
    Ns gap sequence region length (bp) 23,900
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 20741 1692 24853180 530 0 28628